9 research outputs found
Fast determination of coarse grained cell anisotropy and size in epithelial tissue images using Fourier transform
Mechanical strain and stress play a major role in biological processes such
as wound healing or morphogenesis. To assess this role quantitatively, fixed or
live images of tissues are acquired at a cellular precision in large fields of
views. To exploit these data, large numbers of cells have to be analyzed to
extract cell shape anisotropy and cell size. Most frequently, this is performed
through detailed individual cell contour determination, using so-called
segmentation computer programs, complemented if necessary by manual detection
and error corrections. However, a coarse grained and faster technique can be
recommended in at least three situations. First, when detailed information on
individual cell contours is not required, for instance in studies which require
only coarse-grained average information on cell anisotropy. Second, as an
exploratory step to determine whether full segmentation can be potentially
useful. Third, when segmentation is too difficult, for instance due to poor
image quality or too large a cell number. We developed a user-friendly, Fourier
transform-based image analysis pipeline. It is fast (typically cells per
minute with a current laptop computer) and suitable for time, space or ensemble
averages. We validate it on one set of artificial images and on two sets of
fully segmented images, one from a Drosophila pupa and the other from a chicken
embryo; the pipeline results are robust. Perspectives include \textit{in vitro}
tissues, non-biological cellular patterns such as foams, and stacks.Comment: 13 pages; 9 figure
A migrating epithelial monolayer flows like a Maxwell viscoelastic liquid
We perform a bidimensional Stokes experiment in an active cellular material:
an autonomously migrating monolayer of Madin-Darby Canine Kidney (MDCK)
epithelial cells flows around a circular obstacle within a long and narrow
channel, involving an interplay between cell shape changes and neighbour
rearrangements. Based on image analysis of tissue flow and coarse-grained cell
anisotropy, we determine the tissue strain rate, cell deformation and
rearrangement rate fields, which are spatially heterogeneous. We find that the
cell deformation and rearrangement rate fields correlate strongly, which is
compatible with a Maxwell viscoelastic liquid behaviour (and not with a
Kelvin-Voigt viscoelastic solid behaviour). The value of the associated
relaxation time is measured as ~min, is observed to be
independent of obstacle size and division rate, and is increased by inhibiting
myosin activity. In this experiment, the monolayer behaves as a flowing
material with a Weissenberg number close to one which shows that both elastic
and viscous effects can have comparable contributions in the process of
collective cell migration.Comment: 17 pages, 15 figure